Natural Language Processing for Early Diagnosis of Childhood Epilepsy
Summary
Background: Accurate and timely diagnosis is crucial in epilepsy treatment. Diagnostic delay in epilepsy
results in unnecessary risk exposure to psychosocial distress, morbidity, or mortality. Language is an
indispensable source of information for diagnosing epilepsy. Natural language processing, a branch of
artificial intelligence, analyses language to extract information and identify patterns. This study assessed
the diagnostic value of natural language processing to facilitate the early diagnosis of childhood
epilepsy.
Methods: A dataset of 1561 letters from first consultations was available from the University Medical
Center Utrecht and Martini Hospital Groningen. Natural language processing was applied to analyse
textual data and classify the letters as either 'epilepsy' or 'no epilepsy'. The Naïve Bayes model was
employed for text classification. Data was divided into training and test sets to evaluate performance
and generalisability. Training sets identified predictive features, consisting of keywords indicative of
'epilepsy' or 'no epilepsy'. The model's output was compared to the clinician's final diagnosis (gold
standard).
Results: Model accuracy ranges from 0.66 to 0.68. Balanced accuracy varies from 0.67 to 0.72 for
‘epilepsy’ and 0.68 to 0.73 for ‘no epilepsy’. F1 score varies from 0.50 to 0.57 for 'epilepsy' and 0.76 to
0.80 for 'no epilepsy'. AUROC varies from 0.74 to 0.78 for ‘epilepsy’ and 0.73 to 0.77 for ‘no epilepsy’.
AUPRC varies from 0.52 to 0.63 for ‘epilepsy’ and 0.79 to 0.81 for ‘no epilepsy’.
Conclusion: All models demonstrated moderate to good performance, with better performance in
diagnosing ‘no epilepsy’. Improvements are required to enhance accuracy and generalisability.
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